BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039D01SP1|AL430689
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1596 1751 0.0
>3x_Contig1596
Length = 11686
Score = 1751 bits (881), Expect = 0.0
Identities = 897/903 (99%), Gaps = 1/903 (0%)
Strand = Plus / Plus
Query: 1 gcagggagacatcaaattcgtttgatcaggtaaccaggcaatcttcaaacaatgaacgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4429 gcagggagacatcaaattcgtttgatcaggtaaccaggcaatcttcaaacaatgaacgaa 4488
Query: 61 gacctacggattctaaagccataccgagaactttacccaaggataccgttccagacgacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4489 gacctacggattctaaagccataccgagaactttacccaaggataccgttccagacgacg 4548
Query: 121 tacatgctacaccaaaagtggatgacaaggataggatatggacagatatagatacactag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4549 tacatgctacaccaaaagtggatgacaaggataggatatggacagatatagatacactag 4608
Query: 181 atgatgtgaaaagaatggccagagagggcaatactggccttactttcccggataatttcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4609 atgatgtgaaaagaatggccagagagggcaatactggccttactttcccggataatttcg 4668
Query: 241 aagaggatattacccgcttacgccagatgcatgcgaacttgatgcagcacatgaagagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4669 aagaggatattacccgcttacgccagatgcatgcgaacttgatgcagcacatgaagagac 4728
Query: 301 aatcaacagagaccccaggaaatcttgaagaacaacagaaacacatcaatgatatcgtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729 aatcaacagagaccccaggaaatcttgaagaacaacagaaacacatcaatgatatcgtag 4788
Query: 361 ataccattgagagatataactgaataaatacttcaaatcacgtgatgaatcacgtgccac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4789 ataccattgagagatataactgaataaatacttcaaatcacgtgatgaatcacgtgccac 4848
Query: 421 aattaccctgactttttgttgagtattagtggaagctaaggtttccaaggaccaccggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4849 aattaccctgactttttgttgagtattagtggaagctaaggtttccaaggaccaccggtt 4908
Query: 481 tcttctacgtgcctttcactatttgtttactggatggtgcgaaacaaataaaaaaagcgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4909 tcttctacgtgcctttcactatttgtttactggatggtgcgaaacaaataaaaaaagcgg 4968
Query: 541 aagctgacagaaattacaagttgttccgaataacgatgggatatacgaattgatgattga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4969 aagctgacagaaattacaagttgttccgaataacgatgggatatacgaattgatgattga 5028
Query: 601 hcgtagtatggaaaataataggaacgttgagaaaaaaaaggatttggtattttccatcac 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5029 acgtagtatggaaaataataggaacgttgagaaaaaaaaggatttggtattttccatcac 5088
Query: 661 ctgcgaatttgagggaaatggttaacttaaatcgtggattctttatatatatmtcttctc 720
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 5089 ctgcgaatttgagggaaatggttaacttaaatcgtggattctttatatatatatattctc 5148
Query: 721 tggtgaaggttcttgatcaattgcttcttccaattggtatttcgattgtattcttgagtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5149 tggtgaaggttcttgatcaattgcttcttccaattggtatttcgattgtattcttgagtc 5208
Query: 781 acgtagaaaggaatktgtgattagggtttaatcgctgaattctgaagtgaccttttaact 840
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5209 acgtagaaaggaatttgtgattagggtttaatcgctgaattctgaagtgaccttttaact 5268
Query: 841 gaccgtaaagtacaataaaagg-tttaaagttctgttaagatagattctaacacagaaat 899
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 5269 gaccgtaaagtacaataaaaggttttaaagttctgttaagatagattctaaaacagaaat 5328
Query: 900 aaa 902
|||
Sbjct: 5329 aaa 5331
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7806
Number of Sequences: 1807
Number of extensions: 7806
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)